could we use pattern mining for COVID19?
Posted: Wed Apr 06, 2022 12:42 pm
I wonder what are the uses of pattern mining for covid analyses and covid prediction? could someone give me some ideas?
Yes, of course.
If you want to analyze the genome of the COVID 19, it is possible. The data of many strains is public and can be downloaded.
In my research team, we have used the SPMF software to apply various pattern mining algorithm to analyze COVID genome sequences.
You can find some papers that we wrote about this here:
Nawaz, S., Fournier-Viger, P., Shojaee, A., Fujita, H. (2021). Using Artificial Intelligence Techniques for COVID-19 Genome Analysis. Applied Intelligence, 51(5): 3086-3103 [source code and data and the algorithms of SPMF.
Nawaz, M. S., Fournier-Viger, P., Niu, X., Wu, Y., Lin, J. C.-W. (2021). COVID-19 Genome Analysis using Alignment-Free Methods. Proc. 34th Intern. Conf. on Industrial, Engineering and Other Applications of Applied Intelligent Systems (IEA AIE 2021), Springer LNAI, pp. 316-328